Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Gm9870-201ENSMUST00000063874 645 ntBASIC20.57■□□□□ 0.88
Zfp42P22227 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp42P22227 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp42P22227 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp42P22227 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp42P22227 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Zfp42P22227 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Gm15546-201ENSMUST00000122095 826 ntBASIC20.56■□□□□ 0.88
Zfp42P22227 Mir6236-201ENSMUST00000184437 123 ntBASIC20.56■□□□□ 0.88
Zfp42P22227 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Zfp42P22227 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.56■□□□□ 0.88
Zfp42P22227 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.56■□□□□ 0.88
Zfp42P22227 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Zfp42P22227 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp42P22227 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp42P22227 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp42P22227 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp42P22227 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp42P22227 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Zfp42P22227 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Zfp42P22227 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Etf1-202ENSMUST00000180351 108 ntBASIC20.54■□□□□ 0.88
Zfp42P22227 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Zfp42P22227 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Zfp42P22227 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Gm43530-201ENSMUST00000195920 274 ntBASIC20.53■□□□□ 0.88
Zfp42P22227 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.53■□□□□ 0.88
Zfp42P22227 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Zfp42P22227 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Zfp42P22227 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Zfp42P22227 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
Zfp42P22227 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Golph3-202ENSMUST00000226517 2359 ntBASIC20.52■□□□□ 0.88
Zfp42P22227 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Zfp42P22227 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Zfp42P22227 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Zfp42P22227 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Zfp42P22227 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Zfp42P22227 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.51■□□□□ 0.87
Zfp42P22227 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Zfp42P22227 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp42P22227 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp42P22227 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.5■□□□□ 0.87
Zfp42P22227 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.5■□□□□ 0.87
Zfp42P22227 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Zfp42P22227 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp42P22227 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp42P22227 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp42P22227 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Zfp42P22227 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.5■□□□□ 0.87
Zfp42P22227 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Zfp42P22227 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Zfp42P22227 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Zfp42P22227 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Zfp42P22227 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Zfp42P22227 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Zfp42P22227 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.48■□□□□ 0.87
Zfp42P22227 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Zfp42P22227 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Zfp42P22227 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Zfp42P22227 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms