Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a2P08122 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.58■□□□□ 0.57
Col4a2P08122 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a2P08122 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Col4a2P08122 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Col4a2P08122 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Gm13148-201ENSMUST00000118892 745 ntBASIC18.57■□□□□ 0.56
Col4a2P08122 Mir5133-201ENSMUST00000174955 77 ntBASIC18.57■□□□□ 0.56
Col4a2P08122 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Col4a2P08122 Gm7514-201ENSMUST00000209475 934 ntBASIC18.57■□□□□ 0.56
Col4a2P08122 Gm4968-201ENSMUST00000071458 858 ntBASIC18.57■□□□□ 0.56
Col4a2P08122 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Col4a2P08122 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a2P08122 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a2P08122 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a2P08122 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a2P08122 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.56■□□□□ 0.56
Col4a2P08122 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.56■□□□□ 0.56
Col4a2P08122 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.56■□□□□ 0.56
Col4a2P08122 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Col4a2P08122 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.55■□□□□ 0.56
Col4a2P08122 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a2P08122 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Col4a2P08122 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Col4a2P08122 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a2P08122 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a2P08122 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a2P08122 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a2P08122 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a2P08122 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Col4a2P08122 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.55■□□□□ 0.56
Col4a2P08122 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Col4a2P08122 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Col4a2P08122 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a2P08122 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a2P08122 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a2P08122 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a2P08122 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.54■□□□□ 0.56
Col4a2P08122 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a2P08122 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Col4a2P08122 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Col4a2P08122 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.54■□□□□ 0.56
Col4a2P08122 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.54■□□□□ 0.56
Col4a2P08122 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a2P08122 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.53■□□□□ 0.56
Col4a2P08122 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a2P08122 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a2P08122 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a2P08122 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.53■□□□□ 0.56
Col4a2P08122 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Col4a2P08122 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Col4a2P08122 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.52■□□□□ 0.56
Col4a2P08122 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Col4a2P08122 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Col4a2P08122 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.52■□□□□ 0.55
Col4a2P08122 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Col4a2P08122 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Col4a2P08122 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.51■□□□□ 0.55
Col4a2P08122 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.51■□□□□ 0.55
Col4a2P08122 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.51■□□□□ 0.55
Col4a2P08122 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Col4a2P08122 Gm13146-201ENSMUST00000118508 780 ntBASIC18.51■□□□□ 0.55
Col4a2P08122 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.51■□□□□ 0.55
Col4a2P08122 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Col4a2P08122 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.5■□□□□ 0.55
Col4a2P08122 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a2P08122 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a2P08122 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a2P08122 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Col4a2P08122 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
Col4a2P08122 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a2P08122 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.5■□□□□ 0.55
Col4a2P08122 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.5■□□□□ 0.55
Col4a2P08122 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Col4a2P08122 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a2P08122 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Col4a2P08122 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms