Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa4P06798 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa4P06798 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa4P06798 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa4P06798 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hoxa4P06798 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Hoxa4P06798 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Hoxa4P06798 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Hoxa4P06798 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa4P06798 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Hoxa4P06798 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa4P06798 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.4■□□□□ 0.7
Hoxa4P06798 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa4P06798 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa4P06798 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa4P06798 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Hoxa4P06798 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa4P06798 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Hoxa4P06798 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxa4P06798 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Hoxa4P06798 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa4P06798 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Hoxa4P06798 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa4P06798 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa4P06798 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Hoxa4P06798 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa4P06798 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa4P06798 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.38■□□□□ 0.69
Hoxa4P06798 Gm40848-201ENSMUST00000221998 324 ntBASIC19.38■□□□□ 0.69
Hoxa4P06798 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa4P06798 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa4P06798 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.38■□□□□ 0.69
Hoxa4P06798 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Hoxa4P06798 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hoxa4P06798 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.37■□□□□ 0.69
Hoxa4P06798 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.37■□□□□ 0.69
Hoxa4P06798 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Hoxa4P06798 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa4P06798 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa4P06798 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa4P06798 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Hoxa4P06798 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa4P06798 Gm27801-201ENSMUST00000184174 223 ntBASIC19.36■□□□□ 0.69
Hoxa4P06798 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hoxa4P06798 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa4P06798 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa4P06798 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa4P06798 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hoxa4P06798 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.35■□□□□ 0.69
Hoxa4P06798 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa4P06798 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa4P06798 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa4P06798 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hoxa4P06798 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Hoxa4P06798 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa4P06798 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa4P06798 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa4P06798 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa4P06798 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hoxa4P06798 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.34■□□□□ 0.69
Hoxa4P06798 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Hoxa4P06798 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa4P06798 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa4P06798 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hoxa4P06798 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxa4P06798 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Hoxa4P06798 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxa4P06798 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.33■□□□□ 0.69
Hoxa4P06798 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxa4P06798 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.33■□□□□ 0.69
Hoxa4P06798 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hoxa4P06798 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms