Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna1P04756 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chrna1P04756 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.25■□□□□ 0.99
Chrna1P04756 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Chrna1P04756 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Chrna1P04756 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna1P04756 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.24■□□□□ 0.99
Chrna1P04756 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna1P04756 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna1P04756 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Chrna1P04756 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.24■□□□□ 0.99
Chrna1P04756 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna1P04756 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.24■□□□□ 0.99
Chrna1P04756 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chrna1P04756 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.24■□□□□ 0.99
Chrna1P04756 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Chrna1P04756 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Chrna1P04756 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna1P04756 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna1P04756 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chrna1P04756 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chrna1P04756 AA386476-201ENSMUST00000098781 1665 ntBASIC21.22■□□□□ 0.99
Chrna1P04756 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chrna1P04756 Gm13234-201ENSMUST00000120010 747 ntBASIC21.22■□□□□ 0.99
Chrna1P04756 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.22■□□□□ 0.99
Chrna1P04756 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chrna1P04756 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.22■□□□□ 0.99
Chrna1P04756 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Chrna1P04756 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chrna1P04756 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.21■□□□□ 0.99
Chrna1P04756 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.21■□□□□ 0.99
Chrna1P04756 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.21■□□□□ 0.99
Chrna1P04756 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.21■□□□□ 0.99
Chrna1P04756 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chrna1P04756 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Chrna1P04756 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Chrna1P04756 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna1P04756 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.2■□□□□ 0.98
Chrna1P04756 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna1P04756 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna1P04756 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna1P04756 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna1P04756 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.2■□□□□ 0.98
Chrna1P04756 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chrna1P04756 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna1P04756 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna1P04756 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna1P04756 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC21.19■□□□□ 0.98
Chrna1P04756 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.19■□□□□ 0.98
Chrna1P04756 AC154266.1-201ENSMUST00000223190 503 ntBASIC21.19■□□□□ 0.98
Chrna1P04756 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna1P04756 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna1P04756 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna1P04756 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chrna1P04756 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.18■□□□□ 0.98
Chrna1P04756 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Chrna1P04756 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.18■□□□□ 0.98
Chrna1P04756 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
Chrna1P04756 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Chrna1P04756 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chrna1P04756 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna1P04756 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna1P04756 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.17■□□□□ 0.98
Chrna1P04756 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna1P04756 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Chrna1P04756 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Chrna1P04756 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Chrna1P04756 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Chrna1P04756 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chrna1P04756 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.16■□□□□ 0.98
Chrna1P04756 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.16■□□□□ 0.98
Chrna1P04756 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.16■□□□□ 0.98
Chrna1P04756 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Chrna1P04756 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Chrna1P04756 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chrna1P04756 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chrna1P04756 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms