Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1P04202 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tgfb1P04202 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1P04202 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1P04202 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1P04202 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1P04202 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1P04202 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tgfb1P04202 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Tgfb1P04202 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.18■□□□□ 0.5
Tgfb1P04202 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Tgfb1P04202 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Tgfb1P04202 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.17■□□□□ 0.5
Tgfb1P04202 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1P04202 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1P04202 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.17■□□□□ 0.5
Tgfb1P04202 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.17■□□□□ 0.5
Tgfb1P04202 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tgfb1P04202 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.17■□□□□ 0.5
Tgfb1P04202 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.17■□□□□ 0.5
Tgfb1P04202 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1P04202 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1P04202 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Tgfb1P04202 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Tgfb1P04202 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.16■□□□□ 0.5
Tgfb1P04202 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
Tgfb1P04202 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1P04202 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1P04202 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Tgfb1P04202 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1P04202 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tgfb1P04202 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.15■□□□□ 0.5
Tgfb1P04202 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Tgfb1P04202 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tgfb1P04202 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.15■□□□□ 0.5
Tgfb1P04202 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Tgfb1P04202 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfb1P04202 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfb1P04202 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfb1P04202 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tgfb1P04202 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfb1P04202 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfb1P04202 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfb1P04202 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfb1P04202 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfb1P04202 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tgfb1P04202 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tgfb1P04202 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Tgfb1P04202 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.12■□□□□ 0.49
Tgfb1P04202 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.12■□□□□ 0.49
Tgfb1P04202 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Tgfb1P04202 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Tgfb1P04202 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfb1P04202 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfb1P04202 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfb1P04202 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfb1P04202 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfb1P04202 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.11■□□□□ 0.49
Tgfb1P04202 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tgfb1P04202 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.1■□□□□ 0.49
Tgfb1P04202 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.1■□□□□ 0.49
Tgfb1P04202 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.1■□□□□ 0.49
Tgfb1P04202 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Gm9847-201ENSMUST00000052528 599 ntBASIC18.1■□□□□ 0.49
Tgfb1P04202 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tgfb1P04202 AA386476-201ENSMUST00000098781 1665 ntBASIC18.09■□□□□ 0.49
Tgfb1P04202 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfb1P04202 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
Tgfb1P04202 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.09■□□□□ 0.49
Tgfb1P04202 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfb1P04202 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfb1P04202 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.09■□□□□ 0.49
Tgfb1P04202 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.09■□□□□ 0.49
Tgfb1P04202 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tgfb1P04202 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tgfb1P04202 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms