Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TcraP01849 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TcraP01849 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.29□□□□□ -0.12
TcraP01849 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.29□□□□□ -0.12
TcraP01849 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TcraP01849 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TcraP01849 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TcraP01849 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TcraP01849 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
TcraP01849 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TcraP01849 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TcraP01849 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.29□□□□□ -0.12
TcraP01849 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TcraP01849 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TcraP01849 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TcraP01849 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.28□□□□□ -0.12
TcraP01849 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TcraP01849 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TcraP01849 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TcraP01849 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TcraP01849 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TcraP01849 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TcraP01849 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TcraP01849 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
TcraP01849 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.27□□□□□ -0.12
TcraP01849 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TcraP01849 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TcraP01849 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TcraP01849 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TcraP01849 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TcraP01849 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TcraP01849 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TcraP01849 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TcraP01849 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TcraP01849 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
TcraP01849 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC14.26□□□□□ -0.13
TcraP01849 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.26□□□□□ -0.13
TcraP01849 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.26□□□□□ -0.13
TcraP01849 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.26□□□□□ -0.13
TcraP01849 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TcraP01849 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.26□□□□□ -0.13
TcraP01849 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
TcraP01849 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TcraP01849 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TcraP01849 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.25□□□□□ -0.13
TcraP01849 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 AC116713.1-201ENSMUST00000215074 430 ntBASIC14.25□□□□□ -0.13
TcraP01849 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TcraP01849 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TcraP01849 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TcraP01849 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
TcraP01849 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.24□□□□□ -0.13
TcraP01849 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC14.24□□□□□ -0.13
TcraP01849 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.24□□□□□ -0.13
TcraP01849 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
TcraP01849 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TcraP01849 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TcraP01849 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
TcraP01849 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms