Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hdac3O88895 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hdac3O88895 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac3O88895 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hdac3O88895 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac3O88895 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac3O88895 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac3O88895 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.46■□□□□ 0.39
Hdac3O88895 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.46■□□□□ 0.39
Hdac3O88895 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.46■□□□□ 0.39
Hdac3O88895 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hdac3O88895 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac3O88895 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hdac3O88895 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac3O88895 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac3O88895 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.45■□□□□ 0.38
Hdac3O88895 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.45■□□□□ 0.38
Hdac3O88895 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC17.45■□□□□ 0.38
Hdac3O88895 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac3O88895 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac3O88895 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac3O88895 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hdac3O88895 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hdac3O88895 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.44■□□□□ 0.38
Hdac3O88895 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Hdac3O88895 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.44■□□□□ 0.38
Hdac3O88895 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Hdac3O88895 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hdac3O88895 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.44■□□□□ 0.38
Hdac3O88895 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hdac3O88895 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hdac3O88895 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac3O88895 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac3O88895 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Hdac3O88895 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac3O88895 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac3O88895 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac3O88895 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac3O88895 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.43■□□□□ 0.38
Hdac3O88895 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hdac3O88895 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac3O88895 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.42■□□□□ 0.38
Hdac3O88895 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hdac3O88895 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hdac3O88895 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.41■□□□□ 0.38
Hdac3O88895 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hdac3O88895 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac3O88895 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac3O88895 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.4■□□□□ 0.38
Hdac3O88895 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.4■□□□□ 0.38
Hdac3O88895 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Hdac3O88895 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac3O88895 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hdac3O88895 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hdac3O88895 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Hdac3O88895 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac3O88895 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac3O88895 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac3O88895 Mir6236-201ENSMUST00000184437 123 ntBASIC17.39■□□□□ 0.37
Hdac3O88895 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac3O88895 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.39■□□□□ 0.37
Hdac3O88895 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hdac3O88895 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Hdac3O88895 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms