Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
ShdO88834 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ShdO88834 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShdO88834 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ShdO88834 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ShdO88834 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.09■□□□□ 0.81
ShdO88834 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ShdO88834 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.09■□□□□ 0.81
ShdO88834 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ShdO88834 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ShdO88834 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ShdO88834 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ShdO88834 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ShdO88834 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.08■□□□□ 0.81
ShdO88834 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ShdO88834 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ShdO88834 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ShdO88834 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShdO88834 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShdO88834 Gm12821-201ENSMUST00000120022 600 ntBASIC20.07■□□□□ 0.8
ShdO88834 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShdO88834 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.07■□□□□ 0.8
ShdO88834 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShdO88834 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
ShdO88834 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ShdO88834 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ShdO88834 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ShdO88834 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ShdO88834 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ShdO88834 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShdO88834 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.06■□□□□ 0.8
ShdO88834 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShdO88834 Gm12251-201ENSMUST00000117893 792 ntBASIC20.06■□□□□ 0.8
ShdO88834 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShdO88834 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShdO88834 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.06■□□□□ 0.8
ShdO88834 Gm27454-201ENSMUST00000185090 204 ntBASIC20.06■□□□□ 0.8
ShdO88834 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShdO88834 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ShdO88834 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ShdO88834 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ShdO88834 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ShdO88834 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ShdO88834 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ShdO88834 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShdO88834 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.05■□□□□ 0.8
ShdO88834 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShdO88834 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.05■□□□□ 0.8
ShdO88834 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShdO88834 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.05■□□□□ 0.8
ShdO88834 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShdO88834 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ShdO88834 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
ShdO88834 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ShdO88834 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Gm15039-201ENSMUST00000118914 875 ntBASIC20.04■□□□□ 0.8
ShdO88834 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ShdO88834 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ShdO88834 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
ShdO88834 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.03■□□□□ 0.8
ShdO88834 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ShdO88834 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.03■□□□□ 0.8
ShdO88834 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.03■□□□□ 0.8
ShdO88834 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ShdO88834 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ShdO88834 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ShdO88834 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.02■□□□□ 0.8
ShdO88834 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShdO88834 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
ShdO88834 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ShdO88834 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
ShdO88834 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ShdO88834 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
ShdO88834 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ShdO88834 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShdO88834 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ShdO88834 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShdO88834 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.01■□□□□ 0.79
ShdO88834 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.01■□□□□ 0.79
ShdO88834 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.01■□□□□ 0.79
ShdO88834 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
ShdO88834 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShdO88834 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.01■□□□□ 0.79
ShdO88834 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ShdO88834 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
ShdO88834 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms