Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn3O88705 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn3O88705 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.78■□□□□ 0.6
Hcn3O88705 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hcn3O88705 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Hcn3O88705 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcn3O88705 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hcn3O88705 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hcn3O88705 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.77■□□□□ 0.6
Hcn3O88705 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcn3O88705 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcn3O88705 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hcn3O88705 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.77■□□□□ 0.59
Hcn3O88705 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn3O88705 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn3O88705 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
Hcn3O88705 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn3O88705 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn3O88705 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hcn3O88705 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn3O88705 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hcn3O88705 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.75■□□□□ 0.59
Hcn3O88705 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn3O88705 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn3O88705 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn3O88705 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn3O88705 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hcn3O88705 Gm10232-201ENSMUST00000089221 720 ntBASIC18.75■□□□□ 0.59
Hcn3O88705 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Hcn3O88705 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hcn3O88705 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hcn3O88705 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hcn3O88705 Rarb-207ENSMUST00000225921 2756 ntBASIC18.75■□□□□ 0.59
Hcn3O88705 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hcn3O88705 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hcn3O88705 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.73■□□□□ 0.59
Hcn3O88705 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
Hcn3O88705 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.73■□□□□ 0.59
Hcn3O88705 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hcn3O88705 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn3O88705 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn3O88705 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn3O88705 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn3O88705 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn3O88705 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hcn3O88705 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hcn3O88705 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.72■□□□□ 0.59
Hcn3O88705 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn3O88705 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hcn3O88705 Gm15546-201ENSMUST00000122095 826 ntBASIC18.71■□□□□ 0.59
Hcn3O88705 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.71■□□□□ 0.59
Hcn3O88705 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.71■□□□□ 0.59
Hcn3O88705 Gm15820-201ENSMUST00000201566 728 ntBASIC18.71■□□□□ 0.59
Hcn3O88705 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.71■□□□□ 0.59
Hcn3O88705 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn3O88705 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn3O88705 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hcn3O88705 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Hcn3O88705 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.7■□□□□ 0.58
Hcn3O88705 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Hcn3O88705 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Hcn3O88705 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn3O88705 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn3O88705 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hcn3O88705 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn3O88705 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.69■□□□□ 0.58
Hcn3O88705 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.69■□□□□ 0.58
Hcn3O88705 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hcn3O88705 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Hcn3O88705 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hcn3O88705 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hcn3O88705 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms