Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn1O88551 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cldn1O88551 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Gm12441-201ENSMUST00000121806 588 ntBASIC16.78■□□□□ 0.28
Cldn1O88551 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.78■□□□□ 0.28
Cldn1O88551 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.78■□□□□ 0.28
Cldn1O88551 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Cldn1O88551 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cldn1O88551 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn1O88551 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn1O88551 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn1O88551 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.77■□□□□ 0.28
Cldn1O88551 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn1O88551 Gm13234-201ENSMUST00000120010 747 ntBASIC16.77■□□□□ 0.28
Cldn1O88551 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.77■□□□□ 0.28
Cldn1O88551 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cldn1O88551 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Cldn1O88551 Reep4-203ENSMUST00000226563 1444 ntBASIC16.77■□□□□ 0.27
Cldn1O88551 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Cldn1O88551 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.77■□□□□ 0.27
Cldn1O88551 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cldn1O88551 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cldn1O88551 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn1O88551 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Cldn1O88551 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.76■□□□□ 0.27
Cldn1O88551 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn1O88551 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn1O88551 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Cldn1O88551 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.76■□□□□ 0.27
Cldn1O88551 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn1O88551 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn1O88551 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.76■□□□□ 0.27
Cldn1O88551 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn1O88551 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Cldn1O88551 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Cldn1O88551 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Cldn1O88551 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldn1O88551 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Cldn1O88551 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldn1O88551 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.75■□□□□ 0.27
Cldn1O88551 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Cldn1O88551 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Cldn1O88551 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cldn1O88551 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Cldn1O88551 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Cldn1O88551 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.74■□□□□ 0.27
Cldn1O88551 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Cldn1O88551 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Cldn1O88551 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Cldn1O88551 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Cldn1O88551 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.73■□□□□ 0.27
Cldn1O88551 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC16.73■□□□□ 0.27
Cldn1O88551 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.73■□□□□ 0.27
Cldn1O88551 Gm10252-201ENSMUST00000209541 832 ntBASIC16.73■□□□□ 0.27
Cldn1O88551 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.73■□□□□ 0.27
Cldn1O88551 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.73■□□□□ 0.27
Cldn1O88551 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Cldn1O88551 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Cldn1O88551 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cldn1O88551 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cldn1O88551 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.72■□□□□ 0.27
Cldn1O88551 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cldn1O88551 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms