Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.37■□□□□ 0.53
Tnfrsf17O88472 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tnfrsf17O88472 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tnfrsf17O88472 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tnfrsf17O88472 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf17O88472 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf17O88472 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf17O88472 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.33■□□□□ 0.53
Tnfrsf17O88472 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Tnfrsf17O88472 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf17O88472 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tnfrsf17O88472 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.33■□□□□ 0.52
Tnfrsf17O88472 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.33■□□□□ 0.52
Tnfrsf17O88472 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Tnfrsf17O88472 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf17O88472 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Tnfrsf17O88472 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tnfrsf17O88472 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Gm715-201ENSMUST00000117865 831 ntBASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf17O88472 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf17O88472 Gm27275-201ENSMUST00000184318 272 ntBASIC18.3■□□□□ 0.52
Tnfrsf17O88472 Gm26524-201ENSMUST00000192339 390 ntBASIC18.3■□□□□ 0.52
Tnfrsf17O88472 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tnfrsf17O88472 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf17O88472 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf17O88472 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.28■□□□□ 0.52
Tnfrsf17O88472 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms