Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tgfbr3O88393 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tgfbr3O88393 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.73■□□□□ 0.59
Tgfbr3O88393 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tgfbr3O88393 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tgfbr3O88393 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.73■□□□□ 0.59
Tgfbr3O88393 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tgfbr3O88393 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tgfbr3O88393 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tgfbr3O88393 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tgfbr3O88393 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Tgfbr3O88393 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tgfbr3O88393 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.71■□□□□ 0.59
Tgfbr3O88393 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tgfbr3O88393 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.71■□□□□ 0.59
Tgfbr3O88393 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tgfbr3O88393 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Gm10653-202ENSMUST00000139570 835 ntBASIC18.7■□□□□ 0.58
Tgfbr3O88393 Nespas-201ENSMUST00000143738 1083 ntBASIC18.7■□□□□ 0.58
Tgfbr3O88393 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.7■□□□□ 0.58
Tgfbr3O88393 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tgfbr3O88393 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Gm4968-201ENSMUST00000071458 858 ntBASIC18.69■□□□□ 0.58
Tgfbr3O88393 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tgfbr3O88393 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Gm13146-201ENSMUST00000118508 780 ntBASIC18.68■□□□□ 0.58
Tgfbr3O88393 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.68■□□□□ 0.58
Tgfbr3O88393 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tgfbr3O88393 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tgfbr3O88393 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tgfbr3O88393 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Tgfbr3O88393 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tgfbr3O88393 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.67■□□□□ 0.58
Tgfbr3O88393 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tgfbr3O88393 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Tgfbr3O88393 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tgfbr3O88393 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tgfbr3O88393 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms