Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
Ttc3O88196 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Ttc3O88196 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ttc3O88196 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ttc3O88196 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc3O88196 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.82■□□□□ 0.92
Ttc3O88196 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Ttc3O88196 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc3O88196 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc3O88196 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc3O88196 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc3O88196 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Ttc3O88196 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc3O88196 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ttc3O88196 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ttc3O88196 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc3O88196 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Ttc3O88196 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc3O88196 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Ttc3O88196 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc3O88196 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc3O88196 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.81■□□□□ 0.92
Ttc3O88196 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ttc3O88196 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc3O88196 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc3O88196 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.8■□□□□ 0.92
Ttc3O88196 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.8■□□□□ 0.92
Ttc3O88196 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Ttc3O88196 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc3O88196 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc3O88196 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ttc3O88196 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc3O88196 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc3O88196 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.79■□□□□ 0.92
Ttc3O88196 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ttc3O88196 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.79■□□□□ 0.92
Ttc3O88196 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc3O88196 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ttc3O88196 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc3O88196 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc3O88196 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ttc3O88196 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc3O88196 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc3O88196 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc3O88196 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ttc3O88196 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.77■□□□□ 0.92
Ttc3O88196 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ttc3O88196 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.77■□□□□ 0.92
Ttc3O88196 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Ttc3O88196 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc3O88196 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.76■□□□□ 0.91
Ttc3O88196 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc3O88196 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc3O88196 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc3O88196 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ttc3O88196 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Ttc3O88196 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc3O88196 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc3O88196 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Ttc3O88196 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Ttc3O88196 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ttc3O88196 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ttc3O88196 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.75■□□□□ 0.91
Ttc3O88196 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.75■□□□□ 0.91
Ttc3O88196 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ttc3O88196 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.75■□□□□ 0.91
Ttc3O88196 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ttc3O88196 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ttc3O88196 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ttc3O88196 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ttc3O88196 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Ttc3O88196 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ttc3O88196 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ttc3O88196 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ttc3O88196 AA386476-201ENSMUST00000098781 1665 ntBASIC20.73■□□□□ 0.91
Ttc3O88196 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ttc3O88196 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.73■□□□□ 0.91
Ttc3O88196 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.72■□□□□ 0.91
Ttc3O88196 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ttc3O88196 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.72■□□□□ 0.91
Ttc3O88196 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.72■□□□□ 0.91
Ttc3O88196 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ttc3O88196 Gm12933-201ENSMUST00000120203 872 ntBASIC20.72■□□□□ 0.91
Ttc3O88196 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms