Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna4O70174 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chrna4O70174 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chrna4O70174 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.85■□□□□ 0.77
Chrna4O70174 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chrna4O70174 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chrna4O70174 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Chrna4O70174 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chrna4O70174 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna4O70174 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna4O70174 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Chrna4O70174 Gm12251-201ENSMUST00000117893 792 ntBASIC19.84■□□□□ 0.77
Chrna4O70174 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.84■□□□□ 0.77
Chrna4O70174 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna4O70174 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna4O70174 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.84■□□□□ 0.77
Chrna4O70174 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Chrna4O70174 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna4O70174 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna4O70174 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chrna4O70174 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.84■□□□□ 0.77
Chrna4O70174 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chrna4O70174 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chrna4O70174 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
Chrna4O70174 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
Chrna4O70174 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.82■□□□□ 0.76
Chrna4O70174 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chrna4O70174 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Chrna4O70174 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Chrna4O70174 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chrna4O70174 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.81■□□□□ 0.76
Chrna4O70174 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna4O70174 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna4O70174 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna4O70174 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.81■□□□□ 0.76
Chrna4O70174 Gm27454-201ENSMUST00000185090 204 ntBASIC19.81■□□□□ 0.76
Chrna4O70174 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Chrna4O70174 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Chrna4O70174 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Chrna4O70174 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna4O70174 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna4O70174 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna4O70174 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.8■□□□□ 0.76
Chrna4O70174 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna4O70174 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.8■□□□□ 0.76
Chrna4O70174 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna4O70174 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna4O70174 Spcs1-204ENSMUST00000226782 949 ntBASIC19.8■□□□□ 0.76
Chrna4O70174 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Chrna4O70174 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chrna4O70174 AA386476-201ENSMUST00000098781 1665 ntBASIC19.79■□□□□ 0.76
Chrna4O70174 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.79■□□□□ 0.76
Chrna4O70174 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Chrna4O70174 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Chrna4O70174 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Chrna4O70174 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.79■□□□□ 0.76
Chrna4O70174 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Chrna4O70174 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Chrna4O70174 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chrna4O70174 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Chrna4O70174 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chrna4O70174 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.78■□□□□ 0.76
Chrna4O70174 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.78■□□□□ 0.76
Chrna4O70174 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Chrna4O70174 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chrna4O70174 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Chrna4O70174 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms