Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top3aO70157 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Top3aO70157 Gm12922-201ENSMUST00000120626 809 ntBASIC19.69■□□□□ 0.74
Top3aO70157 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.69■□□□□ 0.74
Top3aO70157 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top3aO70157 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top3aO70157 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Top3aO70157 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Top3aO70157 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Top3aO70157 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top3aO70157 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Top3aO70157 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top3aO70157 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top3aO70157 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top3aO70157 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top3aO70157 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Top3aO70157 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top3aO70157 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Top3aO70157 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
Top3aO70157 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Top3aO70157 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.67■□□□□ 0.74
Top3aO70157 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Top3aO70157 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.67■□□□□ 0.74
Top3aO70157 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Top3aO70157 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Top3aO70157 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Top3aO70157 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Top3aO70157 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Top3aO70157 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top3aO70157 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top3aO70157 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top3aO70157 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Top3aO70157 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Top3aO70157 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Top3aO70157 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Top3aO70157 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Top3aO70157 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
Top3aO70157 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.65■□□□□ 0.74
Top3aO70157 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.65■□□□□ 0.74
Top3aO70157 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Top3aO70157 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Top3aO70157 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top3aO70157 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top3aO70157 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.64■□□□□ 0.73
Top3aO70157 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Top3aO70157 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top3aO70157 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top3aO70157 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Top3aO70157 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top3aO70157 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top3aO70157 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.63■□□□□ 0.73
Top3aO70157 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Top3aO70157 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Top3aO70157 Gm9847-201ENSMUST00000052528 599 ntBASIC19.63■□□□□ 0.73
Top3aO70157 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Top3aO70157 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top3aO70157 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top3aO70157 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Top3aO70157 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Top3aO70157 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Top3aO70157 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.62■□□□□ 0.73
Top3aO70157 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.62■□□□□ 0.73
Top3aO70157 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Top3aO70157 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Top3aO70157 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms