Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh12O55134 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.78■□□□□ 0.44
Pcdh12O55134 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh12O55134 Gm15039-201ENSMUST00000118914 875 ntBASIC17.78■□□□□ 0.44
Pcdh12O55134 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.78■□□□□ 0.44
Pcdh12O55134 Gm43137-201ENSMUST00000198052 594 ntBASIC17.78■□□□□ 0.44
Pcdh12O55134 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pcdh12O55134 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh12O55134 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh12O55134 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdh12O55134 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh12O55134 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh12O55134 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdh12O55134 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Pcdh12O55134 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.77■□□□□ 0.44
Pcdh12O55134 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Pcdh12O55134 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Gm45417-201ENSMUST00000209533 758 ntBASIC17.77■□□□□ 0.44
Pcdh12O55134 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdh12O55134 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh12O55134 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
Pcdh12O55134 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Pcdh12O55134 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pcdh12O55134 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh12O55134 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdh12O55134 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.76■□□□□ 0.43
Pcdh12O55134 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.76■□□□□ 0.43
Pcdh12O55134 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh12O55134 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh12O55134 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh12O55134 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pcdh12O55134 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdh12O55134 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.75■□□□□ 0.43
Pcdh12O55134 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.75■□□□□ 0.43
Pcdh12O55134 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.75■□□□□ 0.43
Pcdh12O55134 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pcdh12O55134 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh12O55134 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.74■□□□□ 0.43
Pcdh12O55134 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pcdh12O55134 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pcdh12O55134 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.74■□□□□ 0.43
Pcdh12O55134 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh12O55134 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh12O55134 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
Pcdh12O55134 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh12O55134 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
Pcdh12O55134 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pcdh12O55134 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh12O55134 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdh12O55134 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.72■□□□□ 0.43
Pcdh12O55134 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pcdh12O55134 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdh12O55134 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.72■□□□□ 0.43
Pcdh12O55134 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Pcdh12O55134 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdh12O55134 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh12O55134 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdh12O55134 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh12O55134 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh12O55134 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdh12O55134 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.71■□□□□ 0.43
Pcdh12O55134 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh12O55134 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh12O55134 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh12O55134 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdh12O55134 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pcdh12O55134 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdh12O55134 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdh12O55134 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms