Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1bO55017 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1bO55017 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1bO55017 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.02■□□□□ 0.64
Cacna1bO55017 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Cacna1bO55017 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1bO55017 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1bO55017 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Cacna1bO55017 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.02■□□□□ 0.64
Cacna1bO55017 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.01■□□□□ 0.63
Cacna1bO55017 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.01■□□□□ 0.63
Cacna1bO55017 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.01■□□□□ 0.63
Cacna1bO55017 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cacna1bO55017 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cacna1bO55017 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
Cacna1bO55017 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19■□□□□ 0.63
Cacna1bO55017 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19■□□□□ 0.63
Cacna1bO55017 Gm7977-201ENSMUST00000193787 748 ntBASIC19■□□□□ 0.63
Cacna1bO55017 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cacna1bO55017 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.99■□□□□ 0.63
Cacna1bO55017 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.99■□□□□ 0.63
Cacna1bO55017 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cacna1bO55017 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cacna1bO55017 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.99■□□□□ 0.63
Cacna1bO55017 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.99■□□□□ 0.63
Cacna1bO55017 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Cacna1bO55017 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cacna1bO55017 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1bO55017 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Cacna1bO55017 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.97■□□□□ 0.63
Cacna1bO55017 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.97■□□□□ 0.63
Cacna1bO55017 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Cacna1bO55017 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Cacna1bO55017 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.97■□□□□ 0.63
Cacna1bO55017 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.97■□□□□ 0.63
Cacna1bO55017 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Cacna1bO55017 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Cacna1bO55017 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.96■□□□□ 0.63
Cacna1bO55017 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1bO55017 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1bO55017 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1bO55017 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Cacna1bO55017 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.96■□□□□ 0.63
Cacna1bO55017 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1bO55017 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1bO55017 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cacna1bO55017 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Mir6982-201ENSMUST00000184354 68 ntBASIC18.95■□□□□ 0.62
Cacna1bO55017 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cacna1bO55017 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.95■□□□□ 0.62
Cacna1bO55017 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.95■□□□□ 0.62
Cacna1bO55017 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Cacna1bO55017 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cacna1bO55017 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1bO55017 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1bO55017 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.94■□□□□ 0.62
Cacna1bO55017 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC18.94■□□□□ 0.62
Cacna1bO55017 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1bO55017 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cacna1bO55017 Gm715-201ENSMUST00000117865 831 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 193.1 ms