Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phox2bO35690 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phox2bO35690 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phox2bO35690 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.7■□□□□ 0.74
Phox2bO35690 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Phox2bO35690 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Phox2bO35690 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Phox2bO35690 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Phox2bO35690 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Phox2bO35690 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.69■□□□□ 0.74
Phox2bO35690 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Phox2bO35690 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Phox2bO35690 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Phox2bO35690 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.68■□□□□ 0.74
Phox2bO35690 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.68■□□□□ 0.74
Phox2bO35690 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Phox2bO35690 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Phox2bO35690 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phox2bO35690 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phox2bO35690 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Phox2bO35690 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Phox2bO35690 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phox2bO35690 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.67■□□□□ 0.74
Phox2bO35690 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.67■□□□□ 0.74
Phox2bO35690 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.67■□□□□ 0.74
Phox2bO35690 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.67■□□□□ 0.74
Phox2bO35690 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Phox2bO35690 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Phox2bO35690 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phox2bO35690 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Phox2bO35690 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Phox2bO35690 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.66■□□□□ 0.74
Phox2bO35690 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Phox2bO35690 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Phox2bO35690 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phox2bO35690 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Phox2bO35690 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Phox2bO35690 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phox2bO35690 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.65■□□□□ 0.74
Phox2bO35690 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Phox2bO35690 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Phox2bO35690 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phox2bO35690 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Phox2bO35690 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Phox2bO35690 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Phox2bO35690 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Phox2bO35690 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Phox2bO35690 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Phox2bO35690 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Phox2bO35690 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Phox2bO35690 Trmt13-210ENSMUST00000198454 880 ntBASIC19.64■□□□□ 0.73
Phox2bO35690 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.64■□□□□ 0.73
Phox2bO35690 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Phox2bO35690 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Phox2bO35690 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Phox2bO35690 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Phox2bO35690 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phox2bO35690 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phox2bO35690 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.63■□□□□ 0.73
Phox2bO35690 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phox2bO35690 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.63■□□□□ 0.73
Phox2bO35690 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Phox2bO35690 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.63■□□□□ 0.73
Phox2bO35690 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phox2bO35690 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phox2bO35690 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Phox2bO35690 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Phox2bO35690 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Phox2bO35690 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Phox2bO35690 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phox2bO35690 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.62■□□□□ 0.73
Phox2bO35690 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Phox2bO35690 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Phox2bO35690 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Phox2bO35690 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phox2bO35690 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phox2bO35690 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Phox2bO35690 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Phox2bO35690 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.62■□□□□ 0.73
Phox2bO35690 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Phox2bO35690 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms