Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx8O35652 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx8O35652 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx8O35652 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx8O35652 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Lhx8O35652 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Lhx8O35652 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Lhx8O35652 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Lhx8O35652 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Lhx8O35652 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
Lhx8O35652 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx8O35652 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx8O35652 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx8O35652 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx8O35652 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx8O35652 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx8O35652 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx8O35652 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Lhx8O35652 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Lhx8O35652 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.89■□□□□ 0.61
Lhx8O35652 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.89■□□□□ 0.61
Lhx8O35652 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.89■□□□□ 0.61
Lhx8O35652 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC18.89■□□□□ 0.61
Lhx8O35652 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Lhx8O35652 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Lhx8O35652 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.88■□□□□ 0.61
Lhx8O35652 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lhx8O35652 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Lhx8O35652 Gm42569-201ENSMUST00000200539 472 ntBASIC18.88■□□□□ 0.61
Lhx8O35652 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Lhx8O35652 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Lhx8O35652 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Lhx8O35652 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx8O35652 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.87■□□□□ 0.61
Lhx8O35652 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Lhx8O35652 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.87■□□□□ 0.61
Lhx8O35652 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx8O35652 Spcs1-204ENSMUST00000226782 949 ntBASIC18.87■□□□□ 0.61
Lhx8O35652 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx8O35652 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx8O35652 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Lhx8O35652 Gm25007-201ENSMUST00000083808 133 ntBASIC18.87■□□□□ 0.61
Lhx8O35652 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Lhx8O35652 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lhx8O35652 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.86■□□□□ 0.61
Lhx8O35652 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Lhx8O35652 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.86■□□□□ 0.61
Lhx8O35652 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.86■□□□□ 0.61
Lhx8O35652 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Lhx8O35652 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.86■□□□□ 0.61
Lhx8O35652 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.85■□□□□ 0.61
Lhx8O35652 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Lhx8O35652 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.85■□□□□ 0.61
Lhx8O35652 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lhx8O35652 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Lhx8O35652 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx8O35652 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx8O35652 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Lhx8O35652 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.84■□□□□ 0.61
Lhx8O35652 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.84■□□□□ 0.61
Lhx8O35652 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lhx8O35652 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Lhx8O35652 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx8O35652 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Lhx8O35652 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx8O35652 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lhx8O35652 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms