Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cpsf2O35218 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Cpsf2O35218 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf2O35218 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf2O35218 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf2O35218 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.92■□□□□ 0.94
Cpsf2O35218 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.92■□□□□ 0.94
Cpsf2O35218 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf2O35218 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf2O35218 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cpsf2O35218 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf2O35218 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf2O35218 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.91■□□□□ 0.94
Cpsf2O35218 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf2O35218 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf2O35218 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf2O35218 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf2O35218 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Cpsf2O35218 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cpsf2O35218 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf2O35218 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf2O35218 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf2O35218 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.9■□□□□ 0.94
Cpsf2O35218 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf2O35218 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
Cpsf2O35218 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf2O35218 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf2O35218 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.89■□□□□ 0.94
Cpsf2O35218 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf2O35218 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.89■□□□□ 0.93
Cpsf2O35218 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf2O35218 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf2O35218 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
Cpsf2O35218 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cpsf2O35218 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf2O35218 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Cpsf2O35218 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf2O35218 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cpsf2O35218 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf2O35218 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf2O35218 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf2O35218 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
Cpsf2O35218 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf2O35218 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.88■□□□□ 0.93
Cpsf2O35218 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.88■□□□□ 0.93
Cpsf2O35218 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf2O35218 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf2O35218 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cpsf2O35218 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf2O35218 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf2O35218 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.87■□□□□ 0.93
Cpsf2O35218 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf2O35218 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf2O35218 Gm22238-201ENSMUST00000175222 88 ntBASIC20.87■□□□□ 0.93
Cpsf2O35218 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.87■□□□□ 0.93
Cpsf2O35218 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Cpsf2O35218 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf2O35218 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.86■□□□□ 0.93
Cpsf2O35218 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.86■□□□□ 0.93
Cpsf2O35218 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf2O35218 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf2O35218 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf2O35218 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf2O35218 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf2O35218 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf2O35218 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf2O35218 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cpsf2O35218 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf2O35218 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpsf2O35218 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf2O35218 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpsf2O35218 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf2O35218 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf2O35218 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf2O35218 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf2O35218 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf2O35218 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.83■□□□□ 0.93
Cpsf2O35218 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf2O35218 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf2O35218 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf2O35218 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpsf2O35218 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf2O35218 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpsf2O35218 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms