Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cx3cl1O35188 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
Cx3cl1O35188 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.39■□□□□ 0.53
Cx3cl1O35188 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.39■□□□□ 0.53
Cx3cl1O35188 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.38■□□□□ 0.53
Cx3cl1O35188 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cx3cl1O35188 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Gm15039-201ENSMUST00000118914 875 ntBASIC18.37■□□□□ 0.53
Cx3cl1O35188 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cx3cl1O35188 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cx3cl1O35188 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.36■□□□□ 0.53
Cx3cl1O35188 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cl1O35188 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cx3cl1O35188 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cx3cl1O35188 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cx3cl1O35188 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cx3cl1O35188 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cx3cl1O35188 Gm43017-201ENSMUST00000198296 752 ntBASIC18.35■□□□□ 0.53
Cx3cl1O35188 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cx3cl1O35188 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Serp2-204ENSMUST00000228055 705 ntBASIC18.34■□□□□ 0.53
Cx3cl1O35188 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cx3cl1O35188 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.33■□□□□ 0.53
Cx3cl1O35188 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cx3cl1O35188 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cx3cl1O35188 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cx3cl1O35188 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cx3cl1O35188 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cx3cl1O35188 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.33■□□□□ 0.53
Cx3cl1O35188 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Cx3cl1O35188 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cl1O35188 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cl1O35188 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cx3cl1O35188 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cx3cl1O35188 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms