Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx4O35137 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx4O35137 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.5■□□□□ 0.39
Alx4O35137 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Alx4O35137 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Alx4O35137 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx4O35137 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.5■□□□□ 0.39
Alx4O35137 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx4O35137 Gm9870-201ENSMUST00000063874 645 ntBASIC17.5■□□□□ 0.39
Alx4O35137 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx4O35137 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alx4O35137 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Alx4O35137 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Alx4O35137 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Alx4O35137 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx4O35137 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alx4O35137 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.49■□□□□ 0.39
Alx4O35137 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Alx4O35137 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx4O35137 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx4O35137 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.49■□□□□ 0.39
Alx4O35137 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
Alx4O35137 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alx4O35137 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
Alx4O35137 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.48■□□□□ 0.39
Alx4O35137 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.48■□□□□ 0.39
Alx4O35137 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.48■□□□□ 0.39
Alx4O35137 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.48■□□□□ 0.39
Alx4O35137 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.48■□□□□ 0.39
Alx4O35137 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alx4O35137 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.47■□□□□ 0.39
Alx4O35137 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Alx4O35137 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alx4O35137 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Alx4O35137 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx4O35137 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Alx4O35137 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alx4O35137 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx4O35137 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Alx4O35137 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alx4O35137 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Alx4O35137 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Alx4O35137 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.45■□□□□ 0.38
Alx4O35137 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Alx4O35137 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alx4O35137 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Alx4O35137 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.44■□□□□ 0.38
Alx4O35137 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.44■□□□□ 0.38
Alx4O35137 Golph3-205ENSMUST00000228671 2842 ntBASIC17.44■□□□□ 0.38
Alx4O35137 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Alx4O35137 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Alx4O35137 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Alx4O35137 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Alx4O35137 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.43■□□□□ 0.38
Alx4O35137 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.43■□□□□ 0.38
Alx4O35137 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Alx4O35137 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.42■□□□□ 0.38
Alx4O35137 AA386476-201ENSMUST00000098781 1665 ntBASIC17.42■□□□□ 0.38
Alx4O35137 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.42■□□□□ 0.38
Alx4O35137 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms