Protein–RNA interactions for Protein: O09126

Sema4d, Semaphorin-4D, mousemouse

Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema4dO09126 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sema4dO09126 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sema4dO09126 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sema4dO09126 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sema4dO09126 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sema4dO09126 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sema4dO09126 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sema4dO09126 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Sema4dO09126 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.33■■□□□ 1
Sema4dO09126 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema4dO09126 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.32■■□□□ 1
Sema4dO09126 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.32■■□□□ 1
Sema4dO09126 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema4dO09126 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.32■■□□□ 1
Sema4dO09126 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema4dO09126 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Sema4dO09126 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sema4dO09126 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema4dO09126 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.32■■□□□ 1
Sema4dO09126 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema4dO09126 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema4dO09126 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.31■■□□□ 1
Sema4dO09126 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4dO09126 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sema4dO09126 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4dO09126 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4dO09126 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4dO09126 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4dO09126 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4dO09126 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema4dO09126 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sema4dO09126 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sema4dO09126 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sema4dO09126 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4dO09126 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4dO09126 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.28■■□□□ 1
Sema4dO09126 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4dO09126 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Sema4dO09126 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4dO09126 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.28■■□□□ 1
Sema4dO09126 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4dO09126 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema4dO09126 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sema4dO09126 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Sema4dO09126 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Sema4dO09126 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4dO09126 Gm12251-201ENSMUST00000117893 792 ntBASIC21.26■□□□□ 0.99
Sema4dO09126 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4dO09126 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Sema4dO09126 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4dO09126 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4dO09126 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema4dO09126 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Sema4dO09126 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Sema4dO09126 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.25■□□□□ 0.99
Sema4dO09126 Mir7075-201ENSMUST00000184187 82 ntBASIC21.25■□□□□ 0.99
Sema4dO09126 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema4dO09126 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema4dO09126 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4dO09126 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sema4dO09126 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Sema4dO09126 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.24■□□□□ 0.99
Sema4dO09126 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4dO09126 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4dO09126 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema4dO09126 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.24■□□□□ 0.99
Sema4dO09126 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Sema4dO09126 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Sema4dO09126 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sema4dO09126 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.23■□□□□ 0.99
Sema4dO09126 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sema4dO09126 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sema4dO09126 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.22■□□□□ 0.99
Sema4dO09126 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sema4dO09126 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Sema4dO09126 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema4dO09126 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Sema4dO09126 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms