Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf3O08791 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
Ebf3O08791 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ebf3O08791 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ebf3O08791 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 AV356131-201ENSMUST00000206201 750 ntBASIC20.37■□□□□ 0.85
Ebf3O08791 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ebf3O08791 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ebf3O08791 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf3O08791 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ebf3O08791 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ebf3O08791 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf3O08791 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf3O08791 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ebf3O08791 Golph3-202ENSMUST00000226517 2359 ntBASIC20.35■□□□□ 0.85
Ebf3O08791 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf3O08791 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Ebf3O08791 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Ebf3O08791 Mir6236-201ENSMUST00000184437 123 ntBASIC20.34■□□□□ 0.85
Ebf3O08791 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf3O08791 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ebf3O08791 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf3O08791 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ebf3O08791 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf3O08791 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf3O08791 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ebf3O08791 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.33■□□□□ 0.85
Ebf3O08791 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ebf3O08791 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.32■□□□□ 0.84
Ebf3O08791 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Ebf3O08791 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ebf3O08791 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Ebf3O08791 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.31■□□□□ 0.84
Ebf3O08791 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Ebf3O08791 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.31■□□□□ 0.84
Ebf3O08791 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ebf3O08791 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ebf3O08791 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf3O08791 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.3■□□□□ 0.84
Ebf3O08791 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf3O08791 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.3■□□□□ 0.84
Ebf3O08791 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf3O08791 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf3O08791 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ebf3O08791 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Ebf3O08791 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf3O08791 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf3O08791 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ebf3O08791 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Ebf3O08791 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.28■□□□□ 0.84
Ebf3O08791 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Gm9988-201ENSMUST00000069786 435 ntBASIC20.28■□□□□ 0.84
Ebf3O08791 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ebf3O08791 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf3O08791 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf3O08791 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf3O08791 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ebf3O08791 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.27■□□□□ 0.84
Ebf3O08791 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.27■□□□□ 0.84
Ebf3O08791 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf3O08791 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ebf3O08791 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ebf3O08791 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms