Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tcof1O08784 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Tcof1O08784 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Tcof1O08784 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
Tcof1O08784 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcof1O08784 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tcof1O08784 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcof1O08784 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcof1O08784 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23.07■■□□□ 1.28
Tcof1O08784 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tcof1O08784 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.07■■□□□ 1.28
Tcof1O08784 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Tcof1O08784 Gm43060-201ENSMUST00000200621 289 ntBASIC23.07■■□□□ 1.28
Tcof1O08784 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC23.07■■□□□ 1.28
Tcof1O08784 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Tcof1O08784 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcof1O08784 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcof1O08784 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Tcof1O08784 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Tcof1O08784 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcof1O08784 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcof1O08784 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.06■■□□□ 1.28
Tcof1O08784 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcof1O08784 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Tcof1O08784 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Tcof1O08784 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Tcof1O08784 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Tcof1O08784 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tcof1O08784 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tcof1O08784 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Tcof1O08784 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Tcof1O08784 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Tcof1O08784 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.05■■□□□ 1.28
Tcof1O08784 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Tcof1O08784 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC23.04■■□□□ 1.28
Tcof1O08784 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Tcof1O08784 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Tcof1O08784 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tcof1O08784 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.03■■□□□ 1.28
Tcof1O08784 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tcof1O08784 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tcof1O08784 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.03■■□□□ 1.28
Tcof1O08784 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Tcof1O08784 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Tcof1O08784 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Tcof1O08784 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Tcof1O08784 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tcof1O08784 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.02■■□□□ 1.28
Tcof1O08784 Gm11421-201ENSMUST00000122124 294 ntBASIC23.02■■□□□ 1.28
Tcof1O08784 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tcof1O08784 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC23.02■■□□□ 1.28
Tcof1O08784 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Tcof1O08784 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Tcof1O08784 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.02■■□□□ 1.28
Tcof1O08784 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcof1O08784 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.01■■□□□ 1.27
Tcof1O08784 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcof1O08784 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Tcof1O08784 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcof1O08784 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcof1O08784 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcof1O08784 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tcof1O08784 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Tcof1O08784 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23■■□□□ 1.27
Tcof1O08784 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Tcof1O08784 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Tcof1O08784 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tcof1O08784 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tcof1O08784 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Tcof1O08784 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tcof1O08784 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
Tcof1O08784 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC22.99■■□□□ 1.27
Tcof1O08784 Gm5874-201ENSMUST00000096101 508 ntBASIC22.99■■□□□ 1.27
Tcof1O08784 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tcof1O08784 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Tcof1O08784 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.98■■□□□ 1.27
Tcof1O08784 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tcof1O08784 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms