Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.16■□□□□ 0.98
Ube3aO08759 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Ube3aO08759 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3aO08759 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3aO08759 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3aO08759 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Ube3aO08759 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3aO08759 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.15■□□□□ 0.98
Ube3aO08759 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3aO08759 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Ube3aO08759 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Ube3aO08759 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3aO08759 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.14■□□□□ 0.97
Ube3aO08759 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Ube3aO08759 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Ube3aO08759 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3aO08759 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ube3aO08759 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Ube3aO08759 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Ube3aO08759 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3aO08759 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Ube3aO08759 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.12■□□□□ 0.97
Ube3aO08759 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Gm10232-201ENSMUST00000089221 720 ntBASIC21.12■□□□□ 0.97
Ube3aO08759 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Ube3aO08759 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Ube3aO08759 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ube3aO08759 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3aO08759 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC21.11■□□□□ 0.97
Ube3aO08759 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3aO08759 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3aO08759 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3aO08759 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3aO08759 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3aO08759 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Ube3aO08759 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Ube3aO08759 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Ube3aO08759 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Ube3aO08759 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3aO08759 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC21.09■□□□□ 0.97
Ube3aO08759 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Ube3aO08759 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3aO08759 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3aO08759 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.09■□□□□ 0.97
Ube3aO08759 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3aO08759 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3aO08759 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3aO08759 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ube3aO08759 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Ube3aO08759 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.08■□□□□ 0.97
Ube3aO08759 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Ube3aO08759 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Ube3aO08759 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Ube3aO08759 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Ube3aO08759 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.08■□□□□ 0.96
Ube3aO08759 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.08■□□□□ 0.96
Ube3aO08759 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Ube3aO08759 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ube3aO08759 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.07■□□□□ 0.96
Ube3aO08759 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.07■□□□□ 0.96
Ube3aO08759 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Ube3aO08759 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube3aO08759 Golph3-205ENSMUST00000228671 2842 ntBASIC21.06■□□□□ 0.96
Ube3aO08759 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube3aO08759 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Ube3aO08759 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Ube3aO08759 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.06■□□□□ 0.96
Ube3aO08759 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.06■□□□□ 0.96
Ube3aO08759 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.06■□□□□ 0.96
Ube3aO08759 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Ube3aO08759 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms