Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 Rps24-207ENSMUST00000224568 714 ntBASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Tnfrsf11bO08712 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Tnfrsf11bO08712 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Tnfrsf11bO08712 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf11bO08712 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf11bO08712 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Tnfrsf11bO08712 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.94■□□□□ 0.78
Tnfrsf11bO08712 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf11bO08712 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Tnfrsf11bO08712 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Tnfrsf11bO08712 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Tnfrsf11bO08712 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Tnfrsf11bO08712 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Tnfrsf11bO08712 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf11bO08712 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Tnfrsf11bO08712 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.9■□□□□ 0.78
Tnfrsf11bO08712 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf11bO08712 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Tnfrsf11bO08712 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Tnfrsf11bO08712 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf11bO08712 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf11bO08712 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf11bO08712 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf11bO08712 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.89■□□□□ 0.77
Tnfrsf11bO08712 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf11bO08712 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Tnfrsf11bO08712 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf11bO08712 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf11bO08712 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf11bO08712 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf11bO08712 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf11bO08712 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf11bO08712 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Tnfrsf11bO08712 AA386476-201ENSMUST00000098781 1665 ntBASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Tnfrsf11bO08712 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Tnfrsf11bO08712 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms