Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC9.73□□□□□ -0.85
Rnf213E9Q555 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Rnf213E9Q555 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Rab3c-203ENSMUST00000224180 967 ntBASIC9.73□□□□□ -0.85
Rnf213E9Q555 Arhgef33-211ENSMUST00000225658 473 ntBASIC9.73□□□□□ -0.85
Rnf213E9Q555 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC9.73□□□□□ -0.85
Rnf213E9Q555 Gm10698-201ENSMUST00000182663 604 ntBASIC9.72□□□□□ -0.85
Rnf213E9Q555 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 AC153881.2-201ENSMUST00000214877 204 ntBASIC9.72□□□□□ -0.85
Rnf213E9Q555 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Gm10231-201ENSMUST00000181584 441 ntBASIC9.72□□□□□ -0.85
Rnf213E9Q555 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Gm10175-202ENSMUST00000208752 441 ntBASIC9.72□□□□□ -0.85
Rnf213E9Q555 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf213E9Q555 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC9.72□□□□□ -0.85
Rnf213E9Q555 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Rnf213E9Q555 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Mir5122-201ENSMUST00000175004 89 ntBASIC9.71□□□□□ -0.85
Rnf213E9Q555 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Gm42418-201ENSMUST00000182010 1831 ntBASIC9.71□□□□□ -0.85
Rnf213E9Q555 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Rnf213E9Q555 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf213E9Q555 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.86
Rnf213E9Q555 Gm13509-201ENSMUST00000119733 1308 ntBASIC9.71□□□□□ -0.86
Rnf213E9Q555 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf213E9Q555 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf213E9Q555 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC9.71□□□□□ -0.86
Rnf213E9Q555 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf213E9Q555 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Rnf213E9Q555 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Mir1199-201ENSMUST00000117015 119 ntBASIC9.7□□□□□ -0.86
Rnf213E9Q555 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Dio3-201ENSMUST00000097228 1449 ntBASIC9.7□□□□□ -0.86
Rnf213E9Q555 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Rnf213E9Q555 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Rnf213E9Q555 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rnf213E9Q555 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rnf213E9Q555 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Rnf213E9Q555 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rnf213E9Q555 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC9.69□□□□□ -0.86
Rnf213E9Q555 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Rnf213E9Q555 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC9.69□□□□□ -0.86
Rnf213E9Q555 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Rnf213E9Q555 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Rnf213E9Q555 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms