Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4lE9Q2N0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Gm6139-201ENSMUST00000079261 882 ntBASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4lE9Q2N0 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Gm8493-201ENSMUST00000196881 489 ntBASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.66■□□□□ 0.26
Cpsf4lE9Q2N0 AA386476-201ENSMUST00000098781 1665 ntBASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Gm43173-201ENSMUST00000202246 593 ntBASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cpsf4lE9Q2N0 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Cpsf4lE9Q2N0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cpsf4lE9Q2N0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Cpsf4lE9Q2N0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Cpsf4lE9Q2N0 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Cpsf4lE9Q2N0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms