Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx8D3YU81 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.79■□□□□ 0.92
Rfx8D3YU81 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx8D3YU81 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rfx8D3YU81 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.78■□□□□ 0.92
Rfx8D3YU81 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx8D3YU81 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Rfx8D3YU81 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx8D3YU81 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Rfx8D3YU81 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx8D3YU81 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Rfx8D3YU81 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx8D3YU81 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.77■□□□□ 0.91
Rfx8D3YU81 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.77■□□□□ 0.91
Rfx8D3YU81 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rfx8D3YU81 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Spcs1-204ENSMUST00000226782 949 ntBASIC20.76■□□□□ 0.91
Rfx8D3YU81 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx8D3YU81 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Mir7075-201ENSMUST00000184187 82 ntBASIC20.75■□□□□ 0.91
Rfx8D3YU81 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Rfx8D3YU81 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Gm45417-201ENSMUST00000209533 758 ntBASIC20.74■□□□□ 0.91
Rfx8D3YU81 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx8D3YU81 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.74■□□□□ 0.91
Rfx8D3YU81 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rfx8D3YU81 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.73■□□□□ 0.91
Rfx8D3YU81 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.73■□□□□ 0.91
Rfx8D3YU81 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.73■□□□□ 0.91
Rfx8D3YU81 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx8D3YU81 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx8D3YU81 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx8D3YU81 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx8D3YU81 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx8D3YU81 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx8D3YU81 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rfx8D3YU81 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx8D3YU81 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx8D3YU81 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx8D3YU81 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx8D3YU81 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.71■□□□□ 0.91
Rfx8D3YU81 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.71■□□□□ 0.91
Rfx8D3YU81 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Rfx8D3YU81 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Rfx8D3YU81 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Rfx8D3YU81 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.7■□□□□ 0.9
Rfx8D3YU81 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx8D3YU81 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms