Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Gm12887B1AVM1 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Gm12887B1AVM1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm12887B1AVM1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm12887B1AVM1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Gm12887B1AVM1 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm12887B1AVM1 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Gm12887B1AVM1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Gm12887B1AVM1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Gm12887B1AVM1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Gm12887B1AVM1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Gm12887B1AVM1 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Gm12887B1AVM1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm12887B1AVM1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.83■□□□□ 0.13
Gm12887B1AVM1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Gm12887B1AVM1 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Gm12887B1AVM1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Gm12887B1AVM1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC15.83■□□□□ 0.12
Gm12887B1AVM1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm12887B1AVM1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Gm12887B1AVM1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm12887B1AVM1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Gm12887B1AVM1 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Gm10620-201ENSMUST00000098379 1332 ntBASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Gm12887B1AVM1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Gm12887B1AVM1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Gm12887B1AVM1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms