Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a6B1AVK5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a6B1AVK5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Col4a6B1AVK5 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Col4a6B1AVK5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a6B1AVK5 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.61■□□□□ 0.89
Col4a6B1AVK5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC20.61■□□□□ 0.89
Col4a6B1AVK5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Col4a6B1AVK5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.61■□□□□ 0.89
Col4a6B1AVK5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Col4a6B1AVK5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a6B1AVK5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.59■□□□□ 0.89
Col4a6B1AVK5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a6B1AVK5 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a6B1AVK5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a6B1AVK5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Col4a6B1AVK5 Gm8520-201ENSMUST00000186517 868 ntBASIC20.58■□□□□ 0.89
Col4a6B1AVK5 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a6B1AVK5 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Col4a6B1AVK5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
Col4a6B1AVK5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.58■□□□□ 0.89
Col4a6B1AVK5 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Col4a6B1AVK5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a6B1AVK5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Col4a6B1AVK5 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.58■□□□□ 0.88
Col4a6B1AVK5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.58■□□□□ 0.88
Col4a6B1AVK5 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a6B1AVK5 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a6B1AVK5 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a6B1AVK5 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Col4a6B1AVK5 Gm22240-201ENSMUST00000175225 82 ntBASIC20.57■□□□□ 0.88
Col4a6B1AVK5 Gm5408-201ENSMUST00000197998 747 ntBASIC20.57■□□□□ 0.88
Col4a6B1AVK5 Gm20049-201ENSMUST00000219950 730 ntBASIC20.57■□□□□ 0.88
Col4a6B1AVK5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Gm10252-201ENSMUST00000209541 832 ntBASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col4a6B1AVK5 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a6B1AVK5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col4a6B1AVK5 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.55■□□□□ 0.88
Col4a6B1AVK5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a6B1AVK5 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.55■□□□□ 0.88
Col4a6B1AVK5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a6B1AVK5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col4a6B1AVK5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Gm6365-201ENSMUST00000054711 744 ntBASIC20.54■□□□□ 0.88
Col4a6B1AVK5 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col4a6B1AVK5 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a6B1AVK5 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a6B1AVK5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a6B1AVK5 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a6B1AVK5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col4a6B1AVK5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Col4a6B1AVK5 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Col4a6B1AVK5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Gm37856-201ENSMUST00000191634 999 ntBASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.51■□□□□ 0.87
Col4a6B1AVK5 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col4a6B1AVK5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms