Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col6a4A2AX52 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Gm22325-201ENSMUST00000158904 308 ntBASIC16.57■□□□□ 0.24
Col6a4A2AX52 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col6a4A2AX52 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
Col6a4A2AX52 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Gm6211-202ENSMUST00000167849 925 ntBASIC16.55■□□□□ 0.24
Col6a4A2AX52 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Col6a4A2AX52 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Col6a4A2AX52 Gm7977-201ENSMUST00000193787 748 ntBASIC16.53■□□□□ 0.24
Col6a4A2AX52 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.53■□□□□ 0.24
Col6a4A2AX52 Mir6982-201ENSMUST00000184354 68 ntBASIC16.53■□□□□ 0.24
Col6a4A2AX52 Gm5408-201ENSMUST00000197998 747 ntBASIC16.53■□□□□ 0.24
Col6a4A2AX52 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Col6a4A2AX52 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a4A2AX52 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a4A2AX52 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a4A2AX52 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.52■□□□□ 0.24
Col6a4A2AX52 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a4A2AX52 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Col6a4A2AX52 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a4A2AX52 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.52■□□□□ 0.23
Col6a4A2AX52 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.52■□□□□ 0.23
Col6a4A2AX52 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Col6a4A2AX52 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.51■□□□□ 0.23
Col6a4A2AX52 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Col6a4A2AX52 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a4A2AX52 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Col6a4A2AX52 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms