Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn1aA2APX8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.78■□□□□ 0.92
Scn1aA2APX8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn1aA2APX8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn1aA2APX8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scn1aA2APX8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.77■□□□□ 0.92
Scn1aA2APX8 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.77■□□□□ 0.92
Scn1aA2APX8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn1aA2APX8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.77■□□□□ 0.91
Scn1aA2APX8 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Scn1aA2APX8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
Scn1aA2APX8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Scn1aA2APX8 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn1aA2APX8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scn1aA2APX8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.76■□□□□ 0.91
Scn1aA2APX8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.76■□□□□ 0.91
Scn1aA2APX8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn1aA2APX8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn1aA2APX8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Scn1aA2APX8 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.75■□□□□ 0.91
Scn1aA2APX8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn1aA2APX8 Gm8495-201ENSMUST00000188740 694 ntBASIC20.75■□□□□ 0.91
Scn1aA2APX8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn1aA2APX8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn1aA2APX8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn1aA2APX8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.75■□□□□ 0.91
Scn1aA2APX8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scn1aA2APX8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn1aA2APX8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn1aA2APX8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn1aA2APX8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
Scn1aA2APX8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
Scn1aA2APX8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Scn1aA2APX8 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Scn1aA2APX8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn1aA2APX8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Scn1aA2APX8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn1aA2APX8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Gm10849-201ENSMUST00000100397 618 ntBASIC20.73■□□□□ 0.91
Scn1aA2APX8 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn1aA2APX8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Scn1aA2APX8 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn1aA2APX8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn1aA2APX8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn1aA2APX8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Scn1aA2APX8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.71■□□□□ 0.91
Scn1aA2APX8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn1aA2APX8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn1aA2APX8 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn1aA2APX8 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn1aA2APX8 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.71■□□□□ 0.91
Scn1aA2APX8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Scn1aA2APX8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scn1aA2APX8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scn1aA2APX8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Scn1aA2APX8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Scn1aA2APX8 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.7■□□□□ 0.9
Scn1aA2APX8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn1aA2APX8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn1aA2APX8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.69■□□□□ 0.9
Scn1aA2APX8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scn1aA2APX8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn1aA2APX8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn1aA2APX8 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.69■□□□□ 0.9
Scn1aA2APX8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn1aA2APX8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn1aA2APX8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.69■□□□□ 0.9
Scn1aA2APX8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Scn1aA2APX8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Scn1aA2APX8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn1aA2APX8 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn1aA2APX8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn1aA2APX8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Scn1aA2APX8 Reep4-203ENSMUST00000226563 1444 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms