Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ubr4A2AN08 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Rab3c-203ENSMUST00000224180 967 ntBASIC10.6□□□□□ -0.71
Ubr4A2AN08 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ubr4A2AN08 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Gm15378-201ENSMUST00000121894 207 ntBASIC10.59□□□□□ -0.71
Ubr4A2AN08 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Ubr4A2AN08 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC10.58□□□□□ -0.72
Ubr4A2AN08 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Ubr4A2AN08 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Gm38205-201ENSMUST00000192243 258 ntBASIC10.57□□□□□ -0.72
Ubr4A2AN08 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Ubr4A2AN08 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Gm13534-201ENSMUST00000121169 513 ntBASIC10.56□□□□□ -0.72
Ubr4A2AN08 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Ubr4A2AN08 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr4A2AN08 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm11539-201ENSMUST00000119837 557 ntBASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm13436-201ENSMUST00000120418 567 ntBASIC10.55□□□□□ -0.72
Ubr4A2AN08 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm7889-201ENSMUST00000185591 958 ntBASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 H3f3aos-201ENSMUST00000097448 2905 ntBASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC10.55□□□□□ -0.72
Ubr4A2AN08 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms