Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28729A0A1B0GSW2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm28729A0A1B0GSW2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Gm28729A0A1B0GSW2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
Gm28729A0A1B0GSW2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm28729A0A1B0GSW2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm28729A0A1B0GSW2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
Gm28729A0A1B0GSW2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm12933-201ENSMUST00000120203 872 ntBASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Gm28729A0A1B0GSW2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Gm28729A0A1B0GSW2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Gm28729A0A1B0GSW2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm38205-201ENSMUST00000192243 258 ntBASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Gm28729A0A1B0GSW2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gm28729A0A1B0GSW2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms