Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Golgb1-201ENSMUST00000023534 498 ntBASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Gm12922-201ENSMUST00000120626 809 ntBASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-2A0A0G2JDP3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-2A0A0G2JDP3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms