Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 Gm8493-201ENSMUST00000196881 489 ntBASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trbv26A0A0B4J1P5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Spcs1-204ENSMUST00000226782 949 ntBASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trbv26A0A0B4J1P5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv26A0A0B4J1P5 Dapk1-207ENSMUST00000226059 5009 ntBASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv26A0A0B4J1P5 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Gm6139-201ENSMUST00000079261 882 ntBASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trbv26A0A0B4J1P5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv26A0A0B4J1P5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
Trbv26A0A0B4J1P5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trbv26A0A0B4J1P5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv26A0A0B4J1P5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv26A0A0B4J1P5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Trbv26A0A0B4J1P5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv26A0A0B4J1P5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv26A0A0B4J1P5 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.27■□□□□ 0.19
Trbv26A0A0B4J1P5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv26A0A0B4J1P5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv26A0A0B4J1P5 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms