Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav4-3A0A0B4J1K1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav4-3A0A0B4J1K1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav4-3A0A0B4J1K1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav4-3A0A0B4J1K1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav4-3A0A0B4J1K1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms