Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.2■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.19■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Igkv5-43A0A0B4J1J2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm10849-201ENSMUST00000100397 618 ntBASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm26571-201ENSMUST00000181399 666 ntBASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm42642-201ENSMUST00000200683 355 ntBASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm10033-202ENSMUST00000211874 928 ntBASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Igkv5-43A0A0B4J1J2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-43A0A0B4J1J2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-43A0A0B4J1J2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms