Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.76■□□□□ 0.11
Trbv19A0A0B4J1H4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv19A0A0B4J1H4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv19A0A0B4J1H4 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Gm45102-201ENSMUST00000207427 857 ntBASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv19A0A0B4J1H4 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Gm14117-201ENSMUST00000122417 843 ntBASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Rps24-207ENSMUST00000224568 714 ntBASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv19A0A0B4J1H4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv19A0A0B4J1H4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Trbv19A0A0B4J1H4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv19A0A0B4J1H4 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv19A0A0B4J1H4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Gm8770-201ENSMUST00000121113 1109 ntBASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv19A0A0B4J1H4 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv19A0A0B4J1H4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Gm43759-201ENSMUST00000196925 1261 ntBASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv19A0A0B4J1H4 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv19A0A0B4J1H4 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms