Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Grk6-206ENSMUST00000224995 2971 ntBASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trbv13-3A0A0B4J1H2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trbv13-3A0A0B4J1H2 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Rarb-207ENSMUST00000225921 2756 ntBASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trbv13-3A0A0B4J1H2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms