Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Gm5812-201ENSMUST00000061073 957 ntBASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sirpb1aA0A0A6YYP6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.55■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sirpb1aA0A0A6YYP6 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Gm10232-201ENSMUST00000089221 720 ntBASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sirpb1aA0A0A6YYP6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sirpb1aA0A0A6YYP6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms