Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh7A0A0A6YY83 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh7A0A0A6YY83 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdh7A0A0A6YY83 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdh7A0A0A6YY83 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Mir7075-201ENSMUST00000184187 82 ntBASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdh7A0A0A6YY83 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdh7A0A0A6YY83 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Pcdh7A0A0A6YY83 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdh7A0A0A6YY83 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdh7A0A0A6YY83 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdh7A0A0A6YY83 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Serp2-204ENSMUST00000228055 705 ntBASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdh7A0A0A6YY83 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh7A0A0A6YY83 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh7A0A0A6YY83 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcdh7A0A0A6YY83 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Pcdh7A0A0A6YY83 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh7A0A0A6YY83 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdh7A0A0A6YY83 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Gm8493-201ENSMUST00000196881 489 ntBASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdh7A0A0A6YY83 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Gm43173-201ENSMUST00000202246 593 ntBASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Gm45417-201ENSMUST00000209533 758 ntBASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Notumos-201ENSMUST00000151998 2659 ntBASIC20.2■□□□□ 0.82
Pcdh7A0A0A6YY83 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms