Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm27405-201ENSMUST00000184201 112 ntBASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.17■□□□□ 0.5
Ighv1-43A0A0A6YXN5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ighv1-43A0A0A6YXN5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.17■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 AV356131-201ENSMUST00000206201 750 ntBASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 AA386476-201ENSMUST00000098781 1665 ntBASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.15■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Ighv1-43A0A0A6YXN5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ighv1-43A0A0A6YXN5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms