Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Ighv1-20A0A0A6YX66 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Ighv1-20A0A0A6YX66 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Ighv1-20A0A0A6YX66 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gm5874-201ENSMUST00000096101 508 ntBASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.86■□□□□ 0.13
Ighv1-20A0A0A6YX66 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Ighv1-20A0A0A6YX66 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Gm10493-201ENSMUST00000097270 612 ntBASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ighv1-20A0A0A6YX66 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-20A0A0A6YX66 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ighv1-20A0A0A6YX66 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ighv1-20A0A0A6YX66 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-20A0A0A6YX66 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ighv1-20A0A0A6YX66 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.82■□□□□ 0.12
Ighv1-20A0A0A6YX66 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ighv1-20A0A0A6YX66 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms