Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Trbv23A0A0A6YWQ1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trbv23A0A0A6YWQ1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv23A0A0A6YWQ1 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gm10399-202ENSMUST00000202768 748 ntBASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv23A0A0A6YWQ1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv23A0A0A6YWQ1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Rarb-207ENSMUST00000225921 2756 ntBASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Trbv23A0A0A6YWQ1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv23A0A0A6YWQ1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv23A0A0A6YWQ1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trbv23A0A0A6YWQ1 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.77■□□□□ 0.28
Trbv23A0A0A6YWQ1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv23A0A0A6YWQ1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv23A0A0A6YWQ1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
Trbv23A0A0A6YWQ1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv23A0A0A6YWQ1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbv23A0A0A6YWQ1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv23A0A0A6YWQ1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms