Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.08■□□□□ 0
Trav21-dv12A0A075B6C4 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Rps24-207ENSMUST00000224568 714 ntBASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav21-dv12A0A075B6C4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Gm14117-201ENSMUST00000122417 843 ntBASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Trav21-dv12A0A075B6C4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav21-dv12A0A075B6C4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Trav21-dv12A0A075B6C4 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav21-dv12A0A075B6C4 Gm15043-201ENSMUST00000118843 1543 ntBASIC15.05■□□□□ -0
Trav21-dv12A0A075B6C4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav21-dv12A0A075B6C4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav21-dv12A0A075B6C4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC15.05■□□□□ -0
Trav21-dv12A0A075B6C4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav21-dv12A0A075B6C4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav21-dv12A0A075B6C4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Trav21-dv12A0A075B6C4 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav21-dv12A0A075B6C4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Gm45102-201ENSMUST00000207427 857 ntBASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC15.02■□□□□ -0
Trav21-dv12A0A075B6C4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav21-dv12A0A075B6C4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav21-dv12A0A075B6C4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Trav21-dv12A0A075B6C4 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav21-dv12A0A075B6C4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav21-dv12A0A075B6C4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms