Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC14.69□□□□□ -0.06
Trav12d-3A0A075B6A4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm37811-201ENSMUST00000192416 2601 ntBASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12d-3A0A075B6A4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12d-3A0A075B6A4 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.66□□□□□ -0.06
Trav12d-3A0A075B6A4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav12d-3A0A075B6A4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12d-3A0A075B6A4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12d-3A0A075B6A4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms