Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav9d-1A0A075B699 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Etf1-202ENSMUST00000180351 108 ntBASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav9d-1A0A075B699 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Gm15546-201ENSMUST00000122095 826 ntBASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Mir6236-201ENSMUST00000184437 123 ntBASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav9d-1A0A075B699 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Gm43530-201ENSMUST00000195920 274 ntBASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav9d-1A0A075B699 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.09■□□□□ 0.01
Trav9d-1A0A075B699 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trav9d-1A0A075B699 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav9d-1A0A075B699 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9d-1A0A075B699 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9d-1A0A075B699 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms